Books and Chapters

[80] J. V. Clark, P. Marepalli, R. Bansal, “Modeling, Design, and Simulation of N/MEMS by Integrating Finite Element, Lumped Element, and System Level Analyses”, in Computational Finite Element Methods in Nanotchnology, Editor S. Musa, Taylor & Francis Group, 2012. 

[79] J. V. Clark, “System-Level Modeling of M/NEMS”, in Computational Nanotechnology: Modeling and Applications with MATLAB, Editor S. Musa, CRC, 2011. 

[78] J. V. Clark co-editor, in Encyclopedia of Nanotechnology, Editor B. Bhushan, Springer, 2012. 

[77] J. V. Clark, “SUGAR: A SPICE for MEMS”, in System-Level Modeling of MEMS, Editor H. Baltes and T. Bechtold, John Wiley and Sons, 2011. 

[76] J. V. Clark, Modeling & Simulation of Complex Engineered Systems, text for EE595M: Modeling & Simulation of Complex Engineered Systems, Spring 2009-2011.

[75] J. V. Clark, contributions of engineering problems to each chapter, C++ for Everyone by C. Horstmann, John Wiley and Sons, 2011.

Journal and Conference Publications

[74] F. Li, D. Peroulis, J. V. Clark, “\Measurement of Flexure Width by Measuring Capacitance,” Journal of Microelectromechanical Systems Letters, February 2014. 

[73] F. Li, J. V. Clark, “Self-Calibration for MEMS with Comb Drives: Measurement of Gap,” Journal of Microelectromechanical Systems Letters, Vol. 21, No. 5, October 2012. 

[72] F. Li, J. V. Clark, “Improved Modeling of the Comb Drive Levitation Effect by Using Schwartz-Christoffel Mapping,” Sensors and Transducers Journal, Vol.139, No. 4, pp.24-34 April 2012.

[72] R. Bansal, J. V. Clark, “Lumped modeling of carbon nanotubes for M/NEMS simulation,” Journal of Microsystem Technologies, Vol. 18. No 12, pp. 1993-1970, Dec. 2012. 

[71] F. Li, J. V. Clark, “Online Capacitance Modeling Tool for Conductors Represented as Simply-Connected Polygonal Geometries in 2.5D”, Journal of Sensor Technology, (Accepted 2012).

[70] R. Bansal, J. V. Clark, “Simplifying the Design, Analysis, and Layout of a N/MEMS Material Testing Device,” Sensors and Transducers Journal, Vol.13, Special Issue, pp.87-97, December 2011.

[69] P. Marepalli, A. Magana, M. R. Taleyarkhan, N. Sambamurthy, and J. V. Clark, “SugarAid 0.2: An Online Learning Tool for Improving Engineering Exam Scores,” Journal of Online Engineering Education, Vol. 2, No. 1, pp. 1-9, 2011.

[68] S. M. Musa, M. N. O. Sadiku, and J. V. Clark, “Finite Element Analysis for Electromagnetic Parameters of Multiconductor Interconnects in Multilayered Dielectric Media”, International Journal of Research and Reviews in Computer Science, Vol. 2, No. 6, December 2011.

[67] F. Li, J. V. Clark, “An Online Tool for Simulating Electro-Thermo-Mechanical Flexures Using Distributed and Lumped Analyses” submitting to Journal of Sensors and Transducers, pp. 101-115, March 2009. 

[66] J. V. Clark, K. S. J. Pister, “Modeling, Simulation, and Verification of an Advanced Microdevice Using Sugar," Journal of Microelectro-mechanical Systems, pp. 1524-1536, Aug 2007.

[65] S. Sayed, J. V. Clark, “Active control of effective mass, damping, and stiffness of MEMS,” Design, Test, Integration and Packaging of MEMS/MOEMS Symposium (DTIP 2013), Barcelona Spain, 16-18 April 2013.

[64] X. Jin, J. V. Clark, “Minimizing the effect of process variation on performance by optimizing design parameters,” Design, Test, Integration and Packaging of MEMS/MOEMS Symposium (DTIP 2013), Barcelona Spain, 16-18 April 2013.

[63] Post-Packaged Measurement of MEMS Stiffness, Mass, Damping, and Actuation force”, 2012 IMAPS Device Packaging Conference, Scottsdale, AZ, March 5-8, 2012. 

[62] S. Goshal, J. V. Clark, “Re-Inventing MEMS through Genetic Programming,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012.

[61] N. Andrews, J. V. Clark, “Measuring the layer thickness of MEMS using torsional resonance”, Nanotech Conference and Expo, Santa Clara CA, June 18-21, 2012.

[60] S. Sayed, N. Andrews, J. V. Clark, “Towards Electrostatic Force Feedback for Reducing Thermally-Induced Vibrations of MEMS,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[59] X. Jin, J. V. Clark, GyroCube: A CAD Tool for Gyroscope Performance Evaluation,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[50] X. Jin, J. V. Clark, Variation Analyses using SugarCube,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[49] X. Jin, J. V. Clark, “Microrobotic Manipulator with Position feedback,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[47] X. Jin, J. V. Clark, “Self-Calibratable Dynamic Measurement Unit,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[46] A. Chigullapalli, J. V. Clark, “Electro-Thermo-Mechanical Beam Model,” Nanotech Conference and Expo, Santa Clara CA, June 18-21, 2012. 

[45] A. Chigullapalli, J. V. Clark, “Measuring System Mass and Density of MEMS by Electronic Probing”, Nanotech Conference and Expo, Santa Clara CA, June 18-21, 2012.

[44] A. Chigullapalli, J. V. Clark, “ELDA: Extremely Large Deflection Actuators for (nested) Translation or Rotation,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. (Accepted)

[43] A. Chigullapalli, J. V. Clark, “A Very Large Translation Actuator based on Piezoelectric Phenomenon,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012.

[42] A. Chigullapalli, J. V. Clark, “Towards a Self-Calibratable MEMS Absolute Temperature Sensor,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[41] A. Chigullapalli, J. V. Clark, “Modeling the Thermal Interaction between an Atomic Force Microscope Cantilever and Laser Light,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012.

[40] A. Chigullapalli, J. V. Clark, “A Compact Flexure Model that includes Fillet and Anchor Compliances,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[39] A. Chigullapalli, J. V. Clark, “A Method for Measuring the Young’s Modulus of a Packaged MEMS by Electronic Probing,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[38] A. Chigullapalli, J. V. Clark, “Method for Measuring Poisson’s Ratio and Shear Modulus of a Packaged Microstructure by Electronic Probing,” ASME 2012 International Mechanical Engineering Congress and Exposition, Houston, TX, Nov 9-15, 2012. 

[37] R. Baleabail, J. V. Clark, “Using Artificial Intelligence to Learn and Recognize Trajectories Perturbed by Noise”, 3rd Annual International Conference on Advanced Topics in Artificial Intelligence (ATAI),  22 - 23 October 2012. 

[36] F. Li, J. V. Clark, “Measuring and Prescribing Static Stiffness in MEMS”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[35] F. Li, J. V. Clark, “Towards a Self-Calibratable Gravimeter on a Chip: A Theoretical Study”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[34] F. Li, J. V. Clark, “Calibrating the Atomic Force Microscope with Self-Calibratable MEMS”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[33] P. Marepalli, F. Li, J. V. Clark, “SugarX: Real-time Online Experimental Control of MEMS”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[32] P. Marepalli, J. V. Clark, “A Network-Level Layout Tool for MEMS”, In review at Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[31] P. Marepalli, J. V. Clark, “Integration of Sugar, Comsol, Spice, and Simulink”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[30] R. Bansal, J. V. Clark, “Lumped Model of a Carbon Nanotube”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[29] R. Bansal, J. V. Clark, “Simplifying the Designing of a MEMS-based Nanoscale Material Testing Device”, Nanotech 2011, International Nanotechnology Conference and Exhibition, Boston MA, June 13-16, 2011.

[28] Santos, J. V. Clark, “Nanolithography Pen with Multiple Degrees of Freedom,” Comsol Conference 2011, Boston MA, October 15, 2011.

[27] J. Magana, Prabhakar Marepalli, and Jason V. Clark, “Integrating Computational and Engineering Thinking through Online Simulation and Multidisciplinary Systems,” 2011 Frontiers in Education Conference, Rapid City, South Dakota, October 12 - 15, 2011. 

[26] J. V. Clark, Zeng Yi, “Towards an efficient multidisciplinary system-level framework for designing and modeling complex engineered microsystems,” Modeling and Simulation of Microsystems MSM 2008, Boston MA, June 1-5, 2008.   

[25] J. V. Clark, “Modeling a Monolithic Comb Drive for Large-Deflection Multi-DOF Microtransduction,” 17th Biennial IEEE University Government Industry Micro/nano Symposium, July 13-17, 2008, pp. 203-207. 

[24] M. Lundstrom, J. V. Clark, G. Klimeck, and A. Raman, “Nanoelectronics: Metrology and Computation,” International Conference on Frontiers of Characterization, pp. 563-567, Nov 24, 2008. 

[23] F. Li, J. V. Clark, “An Online Tool for Simulating Electro-Thermo-Mechanical Flexures Using Distributed and Lumped Analyses,” Nanotech 2009, Modeling and Simulation of Micro Nano Systems, Houston, TX, pp. 252-255, May 3-7, 2009. 

[22] F. Li, J. V. Clark, “An Online Electrostatics Modeling Tool for Microdevices with Dirichlet Boundary Conditions by Schwarz-Christoffel Mapping”, Nanotech 2010, International Conference on Modeling and Simulation of Microsystems, pp. 585-588, Anaheim CA, June 21-25, 2010. 

[21] P. Marapalli, J. V. Clark, “An Online Tool for Investigating the Performance of Ready-Made Parameterized MEMS,” Nanotech 2010, International Conference on Modeling and Simulation of Microsystems, pp. 689-692, Anaheim CA, June 21-25, 2010. 

[20] F. Li, J. V. Clark, “Improved Modeling of the Comb Drive Levitation Effect,” Nanotech 2010, International Conference on Modeling and Simulation of Microsystems, pp. 252-255, Anaheim CA, June 21-25, 2010. 

[19] J. V. Clark, “Measuring Force, Stiffness, Displacement, and Geometry in the Face of Property Variation,” SEM2010 Annual Conference on Experiment and Applied Mechanics, pp. 67-74, June 7-10, 2010. 

[18] J. Chee, J. V. Clark, “The Effect of Noise on Capacitively Probed MEMS Geometries,” SEM2010 Annual Conference on Experiment and Applied Mechanics, pp. 43-51, June 7-10, 2010. 

[17] J. V. Clark, F. Li, “Towards Microrobots with Insect-Like Dexterity,” Nanotech 2010, International Conference on Modeling and Simulation of Microsystems, pp. 43-51, Anaheim CA, June 21-25, 2010, pp. 368-371. 

[16] J. V. Clark, “Using MEMS as Self-Calibrating Force-Displacement Transducers: A Computational Study,” Nanotech 2010, International Conference on Modeling and Simulation of Microsystems, pp. 364-367, Anaheim CA, June 21-25, 2010. 

[15] J. V. Clark, A. G. Akingba, “Design of a Large Deflection, Linear Transduction Pressure Sensor for Ventilation Support and Research”, 18th Biennial IEEE UGIM (University Government Industry Micro/nano) Symposium, June 28-July 1, 2010. 

[21] F. Li, J. V. Clark, “Practical Measurements of Force, Stiffness, and Geometry of a MEMS Comb Drive Sensor / Actuator by Capacitive Sensing”, 18th Biennial IEEE UGIM (University Government Industry Micro/nano) Symposium, pp. 1-6, June 28-July 1, 2010. 

[20] P. Marepalli, J. V. Clark, “An Online Tool for Determining Geometry as a Function of Performance of Ready-Made MEMS”, 18th Biennial IEEE UGIM (University Government Industry Micro/nano) Symposium, 6 pages, June 28-July 1, 2010. 

[19] J. V. Clark, Y. Zeng, “Complex Engineered MEMS Simulation Using PSugar v0.5”, 18th Biennial IEEE UGIM (University Government Industry Micro/nano) Symposium, June 28-July 1, 2010. 

[18] F. Li, J. V. Clark, “Model Buckling Effect of a Piezoelectric Actuator Fabricated on a Non-Planar Substrate”, 18th Biennial IEEE UGIM (University Government Industry Micro/nano) Symposium, June 28-July 1, 2010, 5 pages. (Poster Presentation)

[17] H. Lee, J. V. Clark, “Thermally Induced-Noise Reduction using Electrostatic Force Feedback”, Comsol Conference 2010, Boston MA, October 7-9, 2010. 

[16] N. Osonwanne, J. V. Clark, “MEMS Comb Drive Gap Reduction Beyond Minimum Feature Size: A Computational Study 2010,” Comsol Conference, Boston MA, October 7-9, 2010. 

[15] G. Akingba, F. Li, J. V. Clark, “Large Deflection, Linear Transduction Pressure Sensor for Ventilation Research,” Biomedical Engineering Society (BMES) Annual Meeting, Austin, TX, October 2010. 

[14] J. V. Clark, D. Garmire, M. Last, J. Demmel, “Practical Techniques for Measuring MEMS Properties,” Nanotech2004, Seventh International Conference on Modeling and Simulation of Microsystems, pp. 402-405, Boston, MA, March 7-11, 2004. 

[13] J. V. Clark, D. Bindel, W. Kao, E. Zhu, A Kuo, N. Zhou, J. Nie, J. Demmel, Z. Bai, S. Govindjee, K. S. J. Pister, M. Gu, A. Agogino, “Addressing the Needs of Complex MEMS Design,” Proceedings IEEE The Fifteenth Annual International Conference on Micro Electro Mechanical Systems, pp. 204-209, Las Vegas, Nevada, January 20-24, 2002. 

[12] Z. Bai, D. Bindel, J. V. Clark, N. Zhou, J. Demmel, K. S. J. Pister, “New Numerical Techniques and Tools in Sugar for 3D MEMS Simulation,” Technical Proceedings of the Fourth International Conference on Modeling and Simulation of Microsystems, pp. 31-34, Hilton Head Island, SC, March 19-21, 2001. 

[11] J. V. Clark, D. Bindel, N. Zhou, S. Bhave, Z. Bai, J. Demmel, K. S. J. Pister, “Sugar: Advancements in a 3D Multi-Domain Simulation Package for MEMS,” Proceedings of the Microscale Systems: Mechanics and Measurements Symposium, pp. 68-75, Portland OR, June 4, 2001. 

[10] J. V. Clark, N. Zhou, K. S. J. Pister, “Modified Nodal Analysis for MEMS with Multi-Energy Domains,” Technical Proceedings of the Fourth International Conference on Modeling and Simulation of Microsystems, pp. 31-34, San Diego CA, March 27-29, 2000. 

[9] J. V. Clark, N. Zhou, D. Bindel, L. Schenato, W. Wu, J. Demmel, K. S. J. Pister, “3D MEMS Simulation Modeling Using Modified Nodal Analysis,” Proceedings of the Microscale Systems: Mechanics and Measurements Symposium, pp. 68-75, , Orlando FL, June 8, 2000.

[8] N. Zhou, J. V. Clark, K. S. J. Pister, “Nodal Analysis for MEMS Design Using Sugar v0.5”, Technical Proceedings of the Fourth International Conference on Modeling and Simulation of Microsystems, pp. 308-313, , Santa Clara CA, April 6-8, 1998. 

[7] J. V. Clark, N. Zhou, K. S. J. Pister, “MEMS Simulation Using Sugar v0.5,” Transducer's Solid-State Sensor and Actuator Workshop, pp. 191-196, , Hilton Head Island, SC, June 8-11, 1998. 

Dissertations and Theses

[6] F. Li, “Self-calibratable micro electro mechanical systems”, Ph.D. Dissertation, Purdue, Dec 2012. Advisor: Prof. J V Clark

[5] P. Marepalli, “Advances in CAD for MEMS”, M.S. Thesis, Purdue, May 2011. Advisor: Prof. J V Clark

[4] J. Chee, “Quality control of MEMS using electro micro metrology”, Ph.D. Dissertation, Purdue, Dec 2009, Advisor: Prof. J V Clark

[3] N. Titus, Explanations-based support for early design”, Ph.D. Dissertation, Purdue, May 2008, Advisor: Prof. J V Clark

[2] J. V. Clark, “Electro Micro Metrology”, Ph.D. Dissertation, University of California at Berkeley, Dec 2005. Advisors: Profs. KSJ Pister, and J Demmel

[1] J. V. Clark, “Laser Trapping of Na-21”, B.S. Thesis, California State University East Bay, Hayward California 1996, Advisor: Prof. L Villanueva